BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B02LP1|AL429162
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1283 580 e-165
3x_Contig863 175 2e-43
>3x_Contig1283
Length = 6261
Score = 580 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 1 gatccaccaaaatattctgtggtttgatgtctctatggcagacattgaccacttgatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gatccaccaaaatattctgtggtttgatgtctctatggcagacattgaccacttgatgca 233
Query: 61 aatagtttaaagatttgaacaattggaacatgtaaatcttgatttcgtaacgatccattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 aatagtttaaagatttgaacaattggaacatgtaaatcttgatttcgtaacgatccattg 173
Query: 121 gttgatgcaaggaaatgaactctttgagccgttgataaagagacatgggcatgtaatcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gttgatgcaaggaaatgaactctttgagccgttgataaagagacatgggcatgtaatcta 113
Query: 181 caatcaaatttagataaagttcttggtccgattgttcaaggaaatagtacttcaaatcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 caatcaaatttagataaagttcttggtccgattgttcaaggaaatagtacttcaaatcga 53
Query: 241 tcaaattcggatgactgatcaatttcatgatctccagttctctattcttaaa 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 tcaaattcggatgactgatcaatttcatgatctccagttctctattcttaaa 1
>3x_Contig863
Length = 2811
Score = 175 bits (88), Expect = 2e-43
Identities = 89/90 (98%)
Strand = Plus / Minus
Query: 829 ccaaattttccaaaaacttcaaacacgcaacgtcttctaagaccagtaaaataaaatatt 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2811 ccaaattttccaaaaacttcaaacacgcaacgtcttctaagaccagtaaaataaaatatt 2752
Query: 889 cagcmcacgcactcacaaacacacgcgcac 918
|||| |||||||||||||||||||||||||
Sbjct: 2751 cagcacacgcactcacaaacacacgcgcac 2722
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,563
Number of Sequences: 1807
Number of extensions: 14563
Number of successful extensions: 92
Number of sequences better than 1.0e-20: 2
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)